The QuasiMotiFinder Server

A server for the identification of signatures and signature-like patterns in protein sequences

Version 4 (Apr-05)

QuasiMotiFinder: protein annotation by searching for evolutionarily conserved motif-like patterns
Gutman R., Berezin C., Wollman R., Rosenberg Y. and Ben-Tal N.
Nucl. Acids Res. 33:W255-W261 (2005). PDF

Protein Sequence

Paste here the sequence in FASTA format:

OR

User-Provided Multiple Sequence Alignment

Enter your own MSA file:
Query sequence name in MSA file:

  P-value and Maximum Number of Pseudo motifs
 

Cutoff P-value for motif Similarity:
Number of possible pseudo-motifs:

Send the results by Email
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Advanced Options (Irrelevant when providing an external MSA)   Collect the Homologues from SWISS-PROTUniProt Max. Number of Homologues No. of PSI-BLAST Iterations 12345 PSI-BLAST E-value Cutoff